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Type: Article
Subjects: Brucella abortus
Cervus canadensis
Cross-species pathogen spillover
Habitat selection
Human-wildlife conflict
Resource selection function
Wildlife disease
Type:Article
Subject:Brucella abortus
Cervus canadensis
Cross-species pathogen spillover
Habitat selection
Human-wildlife conflict
Resource selection function
Wildlife disease
Description:Wildlife reservoirs of infectious disease are a major source of human-wildlife conflict because of the risk of potential spillover associated with commingling of wildlife and livestock. In Montana, the presence of brucellosis (Brucella abortus) in free-ranging elk (Cervus canadensis) populations is of significant management concern because of the risk of disease transmission from elk to livestock. To help mitigate potential conflict, we identified how spillover risk changes through space and time using a combination of elk population, disease, and movement data. We developed resource selection functions using telemetry data from 223 female elk to predict the relative probability of female elk occurrence on a daily basis during the 15 February-30 June transmission risk period. We combined these spatiotemporal predictions with elk seroprevalence, demography, and abortion timing data to identify when and where abortions (the primary transmission route of brucellosis) were most likely to occur. Additionally, we integrated these predictions with spatiotemporal data on livestock distribution to estimate the daily risk of livestock encountering brucellosis-induced elk abortions. We estimated that a minimum of ~17,500 adult female elk lived within our study area, which resulted in a conservative estimate of ~525 brucellosis-induced abortions each year. We predicted that approximately half of the transmission events occurred on livestock properties and 98% of those properties were private ranchlands as opposed to state or federal grazing allotments. Our fine-resolution (250-m spatial, 1-day temporal), large-scale (17,732 km2) predictions of potential elk-to-livestock transmission risk provide wildlife and livestock managers with a useful tool to identify higher risk areas in space and time and proactively focus actions in these areas to separate elk and livestock to reduce spillover risk. [show more]
Type:Article
Subject:Calf-at-heel
Ground surveys
Detection probability (p)
Parturition
Recruitment
Description:Researchers and managers use productivity surveys to evaluate moose populations for harvest and population management purposes, yet such surveys are prone to bias. We incorporated detection probability estimates (p) into spring and summer ground surveys to reduce the influence of observer bias on the estimation of moose parturition dates in Colorado. In our study, the cumulative parturition probability for moose was 0.50 by May 19, and the probability of parturition exceeded 0.9 by May 27. Timing of moose calf parturition in Colorado appears synchronous with parturition in more northern latitudes. Our results can be used to plan ground surveys in a manner that will reduce bias stemming from unobservable and yet-born calves. [show more]
Description:

Led ByKen Logan​

​​Study AreaUncompahgre Plateau

Project StatusCompleted

Research Objectives

  • To test biological assumptions used by CPW to manage mountain lion populations with recreational hunting. 
  • To examine effects of sport-hunting on lion population dynamics.
  • To examine the genetics of a lion population.
  • To develop tools wildlife managers can use to estimate lion abundance.
  • To study lion diseases.
  • To develop strategies for managing lion populations.

Research Description

Colorado Parks and Wildlife managers need reliable information on mountain lions in Colorado in order to develop management strategies that work to address public concerns and maintain healthy lion populations. However, the knowledge and tools needed to do so were limited, promoting this 10-year project.

The purpose of this study is to learn how sport-hunting impacts mountain lion population dynamics, develop tools for estimating lion abundance, and to develop strategies for managing lion populations. This knowledge will be provided to wildlife managers and to the public for application to lion management and conservation.  

This project was designed with two 5-year periods, a reference period and a treatment period. In the reference period (completed 2004-2009), CPW closed the study area to mountain lion hunting. The reference period provided data on lion population dynamics without lion deaths caused by sport-hunting.  During this time, researchers collected data on population abundance, sex and age structure, reproduction, and sources of mortality.

In the treatment period (2009-2014), researchers are manipulating the mountain lion population with sport hunting. The hunting treatment is designed to test assumptions CPW applies to other lion populations managed with sport-hunting in Colorado. The same type of data collected in the reference period is being collected in the treatment period for comparison. 

In both study periods, researchers gathered mountain lion population characteristics by capturing, marking, radio-collaring, and tissue-sampling lions in the study area (e.g., skin, blood, saliva, tongues from dead lions). To date (August 2014), over 220 lions have been captured, marked, and sampled.

Moreover, in collaboration with researchers at Colorado State University and Oklahoma State University, CPW researchers have tested mountain lion tissues for diseases. CPW researchers are also collaborating with geneticists from Arizona State University to examine lion population genetics, relatedness, and reproductive success.

CPW expects the research findings to be applied to improve mountain lion management in Colorado and in public education and outreach. Associated Publications:Logan, K. A. and J. P. Runge. 2020. Effects of hunting on a puma population in Colorado. Colorado Parks and Wildlife.
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Description:

Led By:

Nathaniel Rayl, Mat Alldredge, and Chuck Anderson

Study Areas

  • Bear’s Ears elk herd (DAU E-2)
  • Trinchera elk herd (DAU E-33)
  • Uncompahgre Plateau elk herd (DAU E-20)

Project Status

Ongoing

Research Objectives

  • To estimate calf and adult female survival and cause-specific mortality rates
  • To quantify pregnancy rates and nutritional condition
  • To evaluate factors influencing survival, pregnancy rates, and nutritional condition

Project Description

In Colorado, elk are an important natural resource valued for ecological, consumptive, aesthetic, and economic reasons. In 1910, Colorado had less than 1,000 elk; today, the state population is estimated to be the largest in the country, with more than 290,000 elk. Over the last two decades, however, Colorado Parks and Wildlife has become increasingly concerned about declining calf recruitment (the number of calves making it to adulthood).

In 2017, researchers began a 2-year pilot study to investigate factors influencing elk recruitment in two study areas in the state. The initial pilot project was expanded into a 3rd study area in 2019 and the research continues to better understand elk population dynamics in Colorado and determine how predators, habitat, and weather conditions are impacting elk recruitment in Colorado.

Reports:

Pilot Study: Elk Recruitment and Habitat Use in Colorado (2017-2018)

Evaluating Factors Influencing Elk Recruitment in Colorado (2019-current)

Publications:

Crews, S., N.D. Rayl, M.W. Alldredge, E.J. Bergman, C.R. Anderson Jr., E.H. VanNatta, J.D. Holbrook, and G. Bastille-Rousseau. 2025. Hierarchy in structuring of resource selection: understanding elk selection across space, time, and movement strategies. Ecology and Evolution 15:e71097.

Crews, S., N.D. Rayl, M.W. Alldredge, E.J. Bergman, C.R. Anderson Jr., and G. Bastille-Rousseau. 2025. Drivers of spring migration phenology in Rocky Mountain elk. Scientific Reports 15:7807.

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Type:Text
Subject:Greater sage-grouse
Centrocercus urophasianus
Parachute-Piceance-Roan (PPR) region
Wildlife management
Northwestern Colorado
Description:Implementing effective monitoring and mitigation strategies is crucial for conserving populations of sensitive wildlife species. Concern over the status of greater sage-grouse populations has increased range-wide and in Colorado due to population declines, range contraction, loss and degradation of sagebrush habitat, and potential for listing the species under the Endangered Species Act. Despite untested assumptions, lek counts are widely used as an index of abundance by state agencies to monitor sage-grouse populations. Lek locations are also commonly used to identify and protect important sage-grouse habitat. However, the use of lek counts and locations to monitor and manage sage-grouse populations remains controversial because it is unknown how closely lek-count data track actual changes in male abundance from year to year or if lek buffers are effective at protecting habitat for male sage-grouse during the breeding season. [show more]
Type:Article
Subject:Wolf
Genotyping
Cestode infection
Description:Helminth infections are cryptic and can be difficult to study in wildlife species. Helminth research in wildlife hosts has historically required invasive animal handling and necropsy, while results from noninvasive parasite research, like scat analysis, may not be possible at the helminth species or individual host levels. To increase the utility of noninvasive sampling, individual hosts can be identified by applying molecular methods. This allows for longitudinal sampling of known hosts and can be paired with individual-level covariates. Here we evaluate a combination of methods and existing long-term monitoring data to identify patterns of cestode infections in gray wolves in Yellowstone National Park. Our goals were: (1) Identify the species and apparent prevalence of cestodes infecting Yellowstone wolves; (2) Assess the relationships between wolf biological and social characteristics and cestode infections; (3) Examine how wolf samples were affected by environmental conditions with respect to the success of individual genotyping. We collected over 200 wolf scats from 2018–2020 and conducted laboratory analyses including individual wolf genotyping, sex identification, cestode identification, and fecal glucocorticoid measurements. Wolf genotyping success rate was 45%, which was higher in the winter but decreased with higher precipitation and as more time elapsed between scat deposit and collection. One cestode species was detected in 28% of all fecal samples, and 38% of known individuals. The most common infection was Echinococcus granulosus sensu lato (primarily E. canadensis). Adult wolves had 4x greater odds of having a cestode infection than pups, as well as wolves sampled in the winter. Our methods provide an alternative approach to estimate cestode prevalence and to linking parasites to known individuals in a wild host system, but may be most useful when employed in existing study systems and when field collections are designed to minimize the time between fecal deposition and collection. [show more]
Description:

Led ByJake Ivan

Study AreaStatewide

Project StatusOngoing

Research Objectives

  • To evaluate options to monitor the long-term success of lynx reintroduction efforts.

Project Description

In 1997, Colorado Parks and Wildlife began a large-scale effort to reintroduce lynx into the state with the goal of establishing a self-sustaining population of lynx. Four years after the last lynx was released into the state in 2006, CPW deemed the initial lynx introduction effort a success. Research focus has now shifted towards determining the long-term success of the reintroduction. 

Researchers cannot use traditional methods to estimate abundance of lynx populations because the animals move extensively, exist at low densities, and can be difficult to capture. Instead, this project aims to monitor lynx population trends by using presence/absence data to estimate the proportion of the landscape occupied by lynx.  This proportion should trend up or down as lynx abundance moves up or down.

From 2009 to 2010, researchers tried various methods of detecting lynx in areas where they were known to be present. This work showed that snowtracking surveys conducted by snowmobile were the most efficient means to detect lynx. However, such surveys can only occur in roaded areas. For surveys in wilderness areas, researchers determined that remotely triggered wildlife cameras were the most efficient method for detecting lynx. 

Based on data collected from field research in 2009-2010, researchers determined that a sample of 50 sample units would need to be surveyed annually in the San Juan and South San Juan Mountains in order to be able to detect meaningful trends in lynx occupancy in the region. 

Work will be completed by CPW in partnership with the U.S. Forest Service. Additionally, other ranges throughout the state will be surveyed on a rotating basis such that when the monitoring effort is at full strength, annual data will be collected in the Southwest to monitor trends in the population, and periodic surveys will be conducted elsewhere to determine the extent of the population in the state.  

Associated Publications

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Description:

Led By

Dr. George J. Schisler​

Study Area

Parvin Lake, Red Feather Lakes, CO​

Project Status

Ongoing

Research Objectives

  • To evaluate the survival of different varieties of whirling disease resistant rainbow trout in the wild.

Project Description

To combat rainbow trout population declines caused by whirling disease​, fishery managers started stocking Colorado’s lakes and reservoirs with various strains of rainbow trout shown to be resistant to the disease. However, some trout strains often exhibit characteristics of domestic fish, limiting their ability to survive in the wild, especially when stocked as fingerlings.

Therefore, CPW initiated a research project to compare and test the survival of different strains of whirling disease resistant rainbow trout stocked as fingerlings. Over a span of several years, researchers have stocked Parvin Lake near Fort Collins, CO with more than ten different strains of rainbow trout. Each strain differs slightly in its ability to survive in the wild and its level of resistance to whirling disease. 

Researchers selected Parvin Lake because the reservoir is home to a variety of top predator species, such as brown trout, tiger muskellunge and splake. Thus, yearly monitoring results would identify the whirling disease resistant strains that could survive under high predation pressure and exhibit good growth rates.Researchers also tested each strain for its level of resistance to whirling disease after exposure to the parasite in the reservoir. 

Overall, the results of this study will help researchers identify a strain of rainbow trout that is highly resistant to whirling disease and maximize survival and return to anglers when stocked as fingerlings. By stocking these strains, fishery managers can ensure a high proportion of catchable fish for Colorado’s anglers while also reducing the spread and severity of whirling disease in the state’s lakes and reservoirs. ​

Associated Publications

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Description:

Led ByHeather Johnson, Matt Hammond, Patt Dorsey, Kurt VerCauteren (USDA National Wildlife Research Center), Justin Fischer (USDA National Wildlife Research Center), W. David Walter (USDA National Wildlife Research Center), and Charles Anderson (USDA National Wildlife Research Center).

Study AreaVicinity of Dove Creek, Colorado 

Project StatusCompleted

Research Objectives

  • To test various non-lethal techniques to reduce elk and deer crop depredation.
  • To examine elk and mule deer distribution and migration patterns around agricultural areas to design public hunting opportunities to reduce crop damage.
  • To map and model landscape characteristics associated with elk and deer damage to identify site-specific management strategies to minimize crop depredation.

Project Description

Elk and mule deer provide important recreational, ecological, and economic benefits, but they can also cause substantial damage to crops in rural areas. Crop damage caused by elk and deer accounts for a majority of the state's wildlife damage claims, which Colorado Parks and Wildlife is obligated to pay.

In particular, the sunflower fields around Dove Creek have experienced high rates of damage from elk and deer. Between 2007 and 2009, CPW paid farmers in the region roughly a quarter of a million dollars annually and routinely allocated kill permits, distribution hunts and private land only doe/cow hunts to eliminate animals causing damage. Pressure from local growers over crop damage and frustration from the general public over kill permits prompted CPW to evaluate other management options for reducing crop damage caused by elk and deer. 

As a result, CPW partnered with wildlife damage researchers from the USDA National Wildlife Research Center to test various non-lethal solutions to reduce crop damage. Such techniques include polyrope electric fencing, winged fencing, and an organic repellent. In addition, researchers are tracking deer and elk movement patterns using GPS collars. The data will be used to identify distribution and migration patterns so that public hunts can be designed that target those elk and deer causing conflicts with farmers. In addition, deer and elk location data will be used to model damage potential in relation to field locations, surrounding habitat types, human development, and topography. Information about the location of a crop field in the context of the overall landscape will allow CPW to work with local growers to identify appropriate management strategies to reduce game damage.

Results from this study should enable CPW and local growers to reduce deer and elk crop depredation, leading to a decrease in compensation payments, a decrease in kill permits/distribution hunts, and an increase in public hunting opportunities.ReportsEvaluating solutions to reduce elk and mule deer damage on agricultural reources (2010-2013)

Associated Publications

Johnson, H.E., J.W. Fischer, M. Hammond, P.D. Dorsey, C. Anderson Jr., and K.C. VerCauteren. 2014. Evaluation of techniques to reduce deer and elk damage to agricultural crops. Wildlife Society Bulletin 38:358-365.  https://doi.org/10.1002/wsb.408
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Description:

Led By: Lake and Reservoir Researchers

Study Area: Select reservoirs

Project Status: Ongoing

Research Objectives:Examine the suitability of specialized gill netting protocols for assessing sport fish populations in key Colorado reservoirs.

Project Description

Gill nets are commonly used to monitor fish populations. They are lightweight, easy to use, catch multiple sizes and species of fish simultaneously, and provide information (i.e., numbers and sizes) that can be compared through time. Observed trends in catch information from annual gill net surveys are used to inform fisheries management decisions.

The Lake and Reservoir Research group has been investigating the appropriateness of specialized gill netting protocols developed by the Ontario Ministry of Natural Resources that enable biologists to estimate the total number of fish in a lake or reservoir (i.e., “abundance”). Specifically, lake trout and walleye, which are two highly sought sport fish in Colorado.

Researchers have examined two protocols: Summer Profundal Index Netting (SPIN) for lake trout, and Fall Walleye Index Netting (FWIN) for walleye. Both protocols use gill nets set for a defined duration at multiple depths across all regions of a reservoir, resulting in a rapid, comprehensive survey typically completed over 2-4 days.

Other methods for estimating the abundance of a fish population (like tagging and then recapturing tagged fish) in a lake or reservoir are resource intensive, and can be cost prohibitive. Thus, techniques such as SPIN and FWIN can be valuable when in-depth population assessments are needed to help inform complex management decisions. For example, changes to harvest regulations, how to balance top predators with their prey fish populations, or other challenges managers face.

Associated Publications

Beauchamp, D.A., A.G. Hansen, and D.L. Parrish. 2024. Chapter 7: Coldwater fish in large standing waters. In Standard methods for sampling North American freshwater fishes (2nd edition). Edited by S.A. Bonar, W.A. Hubert, and D.W. Willis. American Fisheries Society, Bethesda, Maryland.

Hansen, A.G. 2019. Size-dependent retention of pelagic-oriented kokanee in multimesh gill nets. North American Journal of Fisheries Management 39:921-932.

Hansen, A.G., M.W. Miller, E.T. Cristan, C.J. Farrell, P. Winkle, M.M. Brandt, K.D. Battige, and J.M. Lepak. 2023. Gill net catchability of walleye (Sander vitreus): are provincial standards suitable for estimating adult density outside the region? Fisheries Research 266:106800.

Pate, W.M., B.M. Johnson, J.M. Lepak, and D. Brauch. 2014. Managing for coexistence of kokanee and trophy lake trout in a montane reservoir. North American Journal of Fisheries Management 34:908-922.

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